Protein–RNA interactions for Protein: A0A1B0GSD2

Slc6a21, Transporter, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a21A0A1B0GSD2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Slc6a21A0A1B0GSD2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Slc6a21A0A1B0GSD2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Slc6a21A0A1B0GSD2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.21■■□□□ 1.47
Slc6a21A0A1B0GSD2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Slc6a21A0A1B0GSD2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Slc6a21A0A1B0GSD2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Slc6a21A0A1B0GSD2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Slc6a21A0A1B0GSD2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Slc6a21A0A1B0GSD2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Slc6a21A0A1B0GSD2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Slc6a21A0A1B0GSD2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Slc6a21A0A1B0GSD2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC24.19■■□□□ 1.46
Slc6a21A0A1B0GSD2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Slc6a21A0A1B0GSD2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC24.19■■□□□ 1.46
Slc6a21A0A1B0GSD2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC24.19■■□□□ 1.46
Slc6a21A0A1B0GSD2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC24.19■■□□□ 1.46
Slc6a21A0A1B0GSD2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Slc6a21A0A1B0GSD2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Slc6a21A0A1B0GSD2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Slc6a21A0A1B0GSD2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC24.18■■□□□ 1.46
Slc6a21A0A1B0GSD2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Slc6a21A0A1B0GSD2 Gm7417-201ENSMUST00000192950 473 ntBASIC24.17■■□□□ 1.46
Slc6a21A0A1B0GSD2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Slc6a21A0A1B0GSD2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Slc6a21A0A1B0GSD2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Slc6a21A0A1B0GSD2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Slc6a21A0A1B0GSD2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Slc6a21A0A1B0GSD2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Slc6a21A0A1B0GSD2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Slc6a21A0A1B0GSD2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
Slc6a21A0A1B0GSD2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
Slc6a21A0A1B0GSD2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
Slc6a21A0A1B0GSD2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Slc6a21A0A1B0GSD2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Slc6a21A0A1B0GSD2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC24.13■■□□□ 1.45
Slc6a21A0A1B0GSD2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.13■■□□□ 1.45
Slc6a21A0A1B0GSD2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Slc6a21A0A1B0GSD2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Slc6a21A0A1B0GSD2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Slc6a21A0A1B0GSD2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Slc6a21A0A1B0GSD2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Slc6a21A0A1B0GSD2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Slc6a21A0A1B0GSD2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Slc6a21A0A1B0GSD2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
Slc6a21A0A1B0GSD2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Slc6a21A0A1B0GSD2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Slc6a21A0A1B0GSD2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.11■■□□□ 1.45
Slc6a21A0A1B0GSD2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.11■■□□□ 1.45
Slc6a21A0A1B0GSD2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Slc6a21A0A1B0GSD2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Slc6a21A0A1B0GSD2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Slc6a21A0A1B0GSD2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Slc6a21A0A1B0GSD2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Slc6a21A0A1B0GSD2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Slc6a21A0A1B0GSD2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Slc6a21A0A1B0GSD2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Slc6a21A0A1B0GSD2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Slc6a21A0A1B0GSD2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Slc6a21A0A1B0GSD2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Slc6a21A0A1B0GSD2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Slc6a21A0A1B0GSD2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Slc6a21A0A1B0GSD2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Slc6a21A0A1B0GSD2 Gm28536-201ENSMUST00000190971 1317 ntBASIC24.08■■□□□ 1.44
Slc6a21A0A1B0GSD2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Slc6a21A0A1B0GSD2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC24.07■■□□□ 1.44
Slc6a21A0A1B0GSD2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Slc6a21A0A1B0GSD2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC24.07■■□□□ 1.44
Slc6a21A0A1B0GSD2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Slc6a21A0A1B0GSD2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Slc6a21A0A1B0GSD2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Slc6a21A0A1B0GSD2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Slc6a21A0A1B0GSD2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.05■■□□□ 1.44
Slc6a21A0A1B0GSD2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Slc6a21A0A1B0GSD2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Slc6a21A0A1B0GSD2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Slc6a21A0A1B0GSD2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Slc6a21A0A1B0GSD2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Slc6a21A0A1B0GSD2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Slc6a21A0A1B0GSD2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Slc6a21A0A1B0GSD2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Slc6a21A0A1B0GSD2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.04■■□□□ 1.44
Slc6a21A0A1B0GSD2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Slc6a21A0A1B0GSD2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Slc6a21A0A1B0GSD2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Slc6a21A0A1B0GSD2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Slc6a21A0A1B0GSD2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Slc6a21A0A1B0GSD2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Slc6a21A0A1B0GSD2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC24.02■■□□□ 1.44
Slc6a21A0A1B0GSD2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
Slc6a21A0A1B0GSD2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Slc6a21A0A1B0GSD2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Slc6a21A0A1B0GSD2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC24.01■■□□□ 1.43
Slc6a21A0A1B0GSD2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Slc6a21A0A1B0GSD2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.01■■□□□ 1.43
Slc6a21A0A1B0GSD2 Gm13241-201ENSMUST00000094493 780 ntBASIC24.01■■□□□ 1.43
Slc6a21A0A1B0GSD2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Slc6a21A0A1B0GSD2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Slc6a21A0A1B0GSD2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Slc6a21A0A1B0GSD2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms