Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.92■■□□□ 1.1
Pcna-ps2A0A140T8V5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcna-ps2A0A140T8V5 Gm11175-201ENSMUST00000116172 543 ntBASIC21.92■■□□□ 1.1
Pcna-ps2A0A140T8V5 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.92■■□□□ 1.1
Pcna-ps2A0A140T8V5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcna-ps2A0A140T8V5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Pcna-ps2A0A140T8V5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Pcna-ps2A0A140T8V5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcna-ps2A0A140T8V5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcna-ps2A0A140T8V5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Pcna-ps2A0A140T8V5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcna-ps2A0A140T8V5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcna-ps2A0A140T8V5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcna-ps2A0A140T8V5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcna-ps2A0A140T8V5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcna-ps2A0A140T8V5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcna-ps2A0A140T8V5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcna-ps2A0A140T8V5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcna-ps2A0A140T8V5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcna-ps2A0A140T8V5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcna-ps2A0A140T8V5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcna-ps2A0A140T8V5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.88■■□□□ 1.09
Pcna-ps2A0A140T8V5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcna-ps2A0A140T8V5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Pcna-ps2A0A140T8V5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcna-ps2A0A140T8V5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcna-ps2A0A140T8V5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.87■■□□□ 1.09
Pcna-ps2A0A140T8V5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcna-ps2A0A140T8V5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcna-ps2A0A140T8V5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcna-ps2A0A140T8V5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcna-ps2A0A140T8V5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcna-ps2A0A140T8V5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcna-ps2A0A140T8V5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcna-ps2A0A140T8V5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Pcna-ps2A0A140T8V5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Pcna-ps2A0A140T8V5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcna-ps2A0A140T8V5 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcna-ps2A0A140T8V5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcna-ps2A0A140T8V5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcna-ps2A0A140T8V5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcna-ps2A0A140T8V5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcna-ps2A0A140T8V5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Pcna-ps2A0A140T8V5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Pcna-ps2A0A140T8V5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.85■■□□□ 1.09
Pcna-ps2A0A140T8V5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.85■■□□□ 1.09
Pcna-ps2A0A140T8V5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Pcna-ps2A0A140T8V5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Pcna-ps2A0A140T8V5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcna-ps2A0A140T8V5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcna-ps2A0A140T8V5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Pcna-ps2A0A140T8V5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.84■■□□□ 1.09
Pcna-ps2A0A140T8V5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Pcna-ps2A0A140T8V5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcna-ps2A0A140T8V5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.84■■□□□ 1.09
Pcna-ps2A0A140T8V5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcna-ps2A0A140T8V5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcna-ps2A0A140T8V5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcna-ps2A0A140T8V5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcna-ps2A0A140T8V5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.83■■□□□ 1.09
Pcna-ps2A0A140T8V5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.83■■□□□ 1.08
Pcna-ps2A0A140T8V5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Pcna-ps2A0A140T8V5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.82■■□□□ 1.08
Pcna-ps2A0A140T8V5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcna-ps2A0A140T8V5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcna-ps2A0A140T8V5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcna-ps2A0A140T8V5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcna-ps2A0A140T8V5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcna-ps2A0A140T8V5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcna-ps2A0A140T8V5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcna-ps2A0A140T8V5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Pcna-ps2A0A140T8V5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.8■■□□□ 1.08
Pcna-ps2A0A140T8V5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcna-ps2A0A140T8V5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcna-ps2A0A140T8V5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcna-ps2A0A140T8V5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcna-ps2A0A140T8V5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcna-ps2A0A140T8V5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcna-ps2A0A140T8V5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.79■■□□□ 1.08
Pcna-ps2A0A140T8V5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcna-ps2A0A140T8V5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcna-ps2A0A140T8V5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.78■■□□□ 1.08
Pcna-ps2A0A140T8V5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcna-ps2A0A140T8V5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcna-ps2A0A140T8V5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
Pcna-ps2A0A140T8V5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcna-ps2A0A140T8V5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcna-ps2A0A140T8V5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcna-ps2A0A140T8V5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.77■■□□□ 1.08
Pcna-ps2A0A140T8V5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.77■■□□□ 1.08
Pcna-ps2A0A140T8V5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcna-ps2A0A140T8V5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcna-ps2A0A140T8V5 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcna-ps2A0A140T8V5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.76■■□□□ 1.07
Pcna-ps2A0A140T8V5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Pcna-ps2A0A140T8V5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pcna-ps2A0A140T8V5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcna-ps2A0A140T8V5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcna-ps2A0A140T8V5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcna-ps2A0A140T8V5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 127.3 ms