Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Iqck-206ENSMUST00000208658 2891 ntBASIC16.48■□□□□ 0.23
Trav3n-3A0A0G2JEM0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.47■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav3n-3A0A0G2JEM0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Trav3n-3A0A0G2JEM0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav3n-3A0A0G2JEM0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.44■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.44■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav3n-3A0A0G2JEM0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.43■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.41■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav3n-3A0A0G2JEM0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav3n-3A0A0G2JEM0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav3n-3A0A0G2JEM0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.38■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.37■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav3n-3A0A0G2JEM0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav3n-3A0A0G2JEM0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms