Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav11A0A0B4J1J9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav11A0A0B4J1J9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav11A0A0B4J1J9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav11A0A0B4J1J9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav11A0A0B4J1J9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav11A0A0B4J1J9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav11A0A0B4J1J9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav11A0A0B4J1J9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav11A0A0B4J1J9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav11A0A0B4J1J9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav11A0A0B4J1J9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav11A0A0B4J1J9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav11A0A0B4J1J9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15□□□□□ -0.01
Trav11A0A0B4J1J9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav11A0A0B4J1J9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav11A0A0B4J1J9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav11A0A0B4J1J9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav11A0A0B4J1J9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav11A0A0B4J1J9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav11A0A0B4J1J9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav11A0A0B4J1J9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav11A0A0B4J1J9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav11A0A0B4J1J9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav11A0A0B4J1J9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav11A0A0B4J1J9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav11A0A0B4J1J9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav11A0A0B4J1J9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC14.97□□□□□ -0.01
Trav11A0A0B4J1J9 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.97□□□□□ -0.01
Trav11A0A0B4J1J9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav11A0A0B4J1J9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav11A0A0B4J1J9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav11A0A0B4J1J9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav11A0A0B4J1J9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav11A0A0B4J1J9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav11A0A0B4J1J9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav11A0A0B4J1J9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav11A0A0B4J1J9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav11A0A0B4J1J9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav11A0A0B4J1J9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav11A0A0B4J1J9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav11A0A0B4J1J9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav11A0A0B4J1J9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav11A0A0B4J1J9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav11A0A0B4J1J9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav11A0A0B4J1J9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav11A0A0B4J1J9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav11A0A0B4J1J9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav11A0A0B4J1J9 Gm42809-201ENSMUST00000198429 1138 ntBASIC14.94□□□□□ -0.02
Trav11A0A0B4J1J9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav11A0A0B4J1J9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav11A0A0B4J1J9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav11A0A0B4J1J9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav11A0A0B4J1J9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav11A0A0B4J1J9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav11A0A0B4J1J9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav11A0A0B4J1J9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav11A0A0B4J1J9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav11A0A0B4J1J9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav11A0A0B4J1J9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav11A0A0B4J1J9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav11A0A0B4J1J9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav11A0A0B4J1J9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav11A0A0B4J1J9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav11A0A0B4J1J9 Notumos-201ENSMUST00000151998 2659 ntBASIC14.92□□□□□ -0.02
Trav11A0A0B4J1J9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav11A0A0B4J1J9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav11A0A0B4J1J9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav11A0A0B4J1J9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav11A0A0B4J1J9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav11A0A0B4J1J9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav11A0A0B4J1J9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav11A0A0B4J1J9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav11A0A0B4J1J9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav11A0A0B4J1J9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav11A0A0B4J1J9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav11A0A0B4J1J9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav11A0A0B4J1J9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav11A0A0B4J1J9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav11A0A0B4J1J9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav11A0A0B4J1J9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav11A0A0B4J1J9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav11A0A0B4J1J9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav11A0A0B4J1J9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav11A0A0B4J1J9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav11A0A0B4J1J9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav11A0A0B4J1J9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav11A0A0B4J1J9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav11A0A0B4J1J9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav11A0A0B4J1J9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav11A0A0B4J1J9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav11A0A0B4J1J9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav11A0A0B4J1J9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav11A0A0B4J1J9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav11A0A0B4J1J9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav11A0A0B4J1J9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav11A0A0B4J1J9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trav11A0A0B4J1J9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.88□□□□□ -0.03
Trav11A0A0B4J1J9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav11A0A0B4J1J9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 291.4 ms