Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv3-4A0A0A6YXF1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.37■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.37■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.35■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.35■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv3-4A0A0A6YXF1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.34■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.34■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.33■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Gm7417-201ENSMUST00000192950 473 ntBASIC18.33■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.33■□□□□ 0.52
Ighv3-4A0A0A6YXF1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.32■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.31■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv3-4A0A0A6YXF1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.31■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.29■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.28■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.28■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.28■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.27■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ighv3-4A0A0A6YXF1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.26■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv3-4A0A0A6YXF1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.24■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv3-4A0A0A6YXF1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.24■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.23■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv3-4A0A0A6YXF1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.22■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv3-4A0A0A6YXF1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.22■□□□□ 0.51
Ighv3-4A0A0A6YXF1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.21■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.21■□□□□ 0.51
Ighv3-4A0A0A6YXF1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms