Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-20A0A0A6YX66 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.74■□□□□ 0.43
Ighv1-20A0A0A6YX66 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-20A0A0A6YX66 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-20A0A0A6YX66 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-20A0A0A6YX66 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ighv1-20A0A0A6YX66 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-20A0A0A6YX66 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Ighv1-20A0A0A6YX66 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Ighv1-20A0A0A6YX66 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-20A0A0A6YX66 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.73■□□□□ 0.43
Ighv1-20A0A0A6YX66 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-20A0A0A6YX66 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.72■□□□□ 0.43
Ighv1-20A0A0A6YX66 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-20A0A0A6YX66 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-20A0A0A6YX66 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.72■□□□□ 0.43
Ighv1-20A0A0A6YX66 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ighv1-20A0A0A6YX66 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.72■□□□□ 0.43
Ighv1-20A0A0A6YX66 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-20A0A0A6YX66 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-20A0A0A6YX66 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ighv1-20A0A0A6YX66 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-20A0A0A6YX66 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-20A0A0A6YX66 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-20A0A0A6YX66 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-20A0A0A6YX66 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.71■□□□□ 0.43
Ighv1-20A0A0A6YX66 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.71■□□□□ 0.43
Ighv1-20A0A0A6YX66 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-20A0A0A6YX66 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-20A0A0A6YX66 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-20A0A0A6YX66 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Ighv1-20A0A0A6YX66 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-20A0A0A6YX66 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.7■□□□□ 0.42
Ighv1-20A0A0A6YX66 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-20A0A0A6YX66 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ighv1-20A0A0A6YX66 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ighv1-20A0A0A6YX66 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-20A0A0A6YX66 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.69■□□□□ 0.42
Ighv1-20A0A0A6YX66 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-20A0A0A6YX66 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-20A0A0A6YX66 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.69■□□□□ 0.42
Ighv1-20A0A0A6YX66 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-20A0A0A6YX66 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.68■□□□□ 0.42
Ighv1-20A0A0A6YX66 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-20A0A0A6YX66 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-20A0A0A6YX66 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ighv1-20A0A0A6YX66 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-20A0A0A6YX66 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.68■□□□□ 0.42
Ighv1-20A0A0A6YX66 Gm45444-201ENSMUST00000211394 898 ntBASIC17.68■□□□□ 0.42
Ighv1-20A0A0A6YX66 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-20A0A0A6YX66 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-20A0A0A6YX66 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-20A0A0A6YX66 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-20A0A0A6YX66 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-20A0A0A6YX66 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.67■□□□□ 0.42
Ighv1-20A0A0A6YX66 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-20A0A0A6YX66 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ighv1-20A0A0A6YX66 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-20A0A0A6YX66 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ighv1-20A0A0A6YX66 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-20A0A0A6YX66 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-20A0A0A6YX66 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-20A0A0A6YX66 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-20A0A0A6YX66 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-20A0A0A6YX66 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.66■□□□□ 0.42
Ighv1-20A0A0A6YX66 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-20A0A0A6YX66 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-20A0A0A6YX66 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-20A0A0A6YX66 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-20A0A0A6YX66 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ighv1-20A0A0A6YX66 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-20A0A0A6YX66 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Ighv1-20A0A0A6YX66 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-20A0A0A6YX66 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.65■□□□□ 0.42
Ighv1-20A0A0A6YX66 Gm43566-201ENSMUST00000196851 808 ntBASIC17.65■□□□□ 0.42
Ighv1-20A0A0A6YX66 Gm5812-201ENSMUST00000061073 957 ntBASIC17.65■□□□□ 0.42
Ighv1-20A0A0A6YX66 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv1-20A0A0A6YX66 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ighv1-20A0A0A6YX66 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ighv1-20A0A0A6YX66 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.64■□□□□ 0.41
Ighv1-20A0A0A6YX66 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
Ighv1-20A0A0A6YX66 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ighv1-20A0A0A6YX66 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ighv1-20A0A0A6YX66 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-20A0A0A6YX66 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-20A0A0A6YX66 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-20A0A0A6YX66 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-20A0A0A6YX66 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-20A0A0A6YX66 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-20A0A0A6YX66 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-20A0A0A6YX66 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ighv1-20A0A0A6YX66 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-20A0A0A6YX66 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-20A0A0A6YX66 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.62■□□□□ 0.41
Ighv1-20A0A0A6YX66 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-20A0A0A6YX66 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-20A0A0A6YX66 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-20A0A0A6YX66 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-20A0A0A6YX66 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ighv1-20A0A0A6YX66 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms