Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trbc1A0A0A6YWV4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trbc1A0A0A6YWV4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.12■□□□□ 0.81
Trbc1A0A0A6YWV4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Trbc1A0A0A6YWV4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.12■□□□□ 0.81
Trbc1A0A0A6YWV4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trbc1A0A0A6YWV4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trbc1A0A0A6YWV4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trbc1A0A0A6YWV4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trbc1A0A0A6YWV4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trbc1A0A0A6YWV4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trbc1A0A0A6YWV4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.11■□□□□ 0.81
Trbc1A0A0A6YWV4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trbc1A0A0A6YWV4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.1■□□□□ 0.81
Trbc1A0A0A6YWV4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.1■□□□□ 0.81
Trbc1A0A0A6YWV4 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.1■□□□□ 0.81
Trbc1A0A0A6YWV4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trbc1A0A0A6YWV4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trbc1A0A0A6YWV4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trbc1A0A0A6YWV4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trbc1A0A0A6YWV4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trbc1A0A0A6YWV4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.09■□□□□ 0.81
Trbc1A0A0A6YWV4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trbc1A0A0A6YWV4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trbc1A0A0A6YWV4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.09■□□□□ 0.81
Trbc1A0A0A6YWV4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trbc1A0A0A6YWV4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trbc1A0A0A6YWV4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trbc1A0A0A6YWV4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trbc1A0A0A6YWV4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trbc1A0A0A6YWV4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trbc1A0A0A6YWV4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trbc1A0A0A6YWV4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trbc1A0A0A6YWV4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trbc1A0A0A6YWV4 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.07■□□□□ 0.8
Trbc1A0A0A6YWV4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trbc1A0A0A6YWV4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trbc1A0A0A6YWV4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trbc1A0A0A6YWV4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trbc1A0A0A6YWV4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trbc1A0A0A6YWV4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trbc1A0A0A6YWV4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trbc1A0A0A6YWV4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trbc1A0A0A6YWV4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trbc1A0A0A6YWV4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trbc1A0A0A6YWV4 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.06■□□□□ 0.8
Trbc1A0A0A6YWV4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trbc1A0A0A6YWV4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbc1A0A0A6YWV4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbc1A0A0A6YWV4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbc1A0A0A6YWV4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbc1A0A0A6YWV4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbc1A0A0A6YWV4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbc1A0A0A6YWV4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbc1A0A0A6YWV4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbc1A0A0A6YWV4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trbc1A0A0A6YWV4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trbc1A0A0A6YWV4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trbc1A0A0A6YWV4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trbc1A0A0A6YWV4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trbc1A0A0A6YWV4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trbc1A0A0A6YWV4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trbc1A0A0A6YWV4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbc1A0A0A6YWV4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trbc1A0A0A6YWV4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbc1A0A0A6YWV4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.03■□□□□ 0.8
Trbc1A0A0A6YWV4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbc1A0A0A6YWV4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trbc1A0A0A6YWV4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trbc1A0A0A6YWV4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Trbc1A0A0A6YWV4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trbc1A0A0A6YWV4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Trbc1A0A0A6YWV4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trbc1A0A0A6YWV4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.01■□□□□ 0.79
Trbc1A0A0A6YWV4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbc1A0A0A6YWV4 Gm10420-201ENSMUST00000121713 882 ntBASIC20.01■□□□□ 0.79
Trbc1A0A0A6YWV4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbc1A0A0A6YWV4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbc1A0A0A6YWV4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbc1A0A0A6YWV4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.01■□□□□ 0.79
Trbc1A0A0A6YWV4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trbc1A0A0A6YWV4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trbc1A0A0A6YWV4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trbc1A0A0A6YWV4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trbc1A0A0A6YWV4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbc1A0A0A6YWV4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.99■□□□□ 0.79
Trbc1A0A0A6YWV4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trbc1A0A0A6YWV4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbc1A0A0A6YWV4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbc1A0A0A6YWV4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbc1A0A0A6YWV4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbc1A0A0A6YWV4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trbc1A0A0A6YWV4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.98■□□□□ 0.79
Trbc1A0A0A6YWV4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trbc1A0A0A6YWV4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trbc1A0A0A6YWV4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trbc1A0A0A6YWV4 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.97■□□□□ 0.79
Trbc1A0A0A6YWV4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trbc1A0A0A6YWV4 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.97■□□□□ 0.79
Trbc1A0A0A6YWV4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 245.3 ms