Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6n-7A0A075B6A6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6n-7A0A075B6A6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Trav6n-7A0A075B6A6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6n-7A0A075B6A6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6n-7A0A075B6A6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6n-7A0A075B6A6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav6n-7A0A075B6A6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6n-7A0A075B6A6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6n-7A0A075B6A6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6n-7A0A075B6A6 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.61■□□□□ 0.57
Trav6n-7A0A075B6A6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.61■□□□□ 0.57
Trav6n-7A0A075B6A6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6n-7A0A075B6A6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.61■□□□□ 0.57
Trav6n-7A0A075B6A6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trav6n-7A0A075B6A6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6n-7A0A075B6A6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6n-7A0A075B6A6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6n-7A0A075B6A6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6n-7A0A075B6A6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6n-7A0A075B6A6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.6■□□□□ 0.57
Trav6n-7A0A075B6A6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6n-7A0A075B6A6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.59■□□□□ 0.57
Trav6n-7A0A075B6A6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.59■□□□□ 0.57
Trav6n-7A0A075B6A6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6n-7A0A075B6A6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trav6n-7A0A075B6A6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trav6n-7A0A075B6A6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trav6n-7A0A075B6A6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav6n-7A0A075B6A6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav6n-7A0A075B6A6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Trav6n-7A0A075B6A6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6n-7A0A075B6A6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6n-7A0A075B6A6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6n-7A0A075B6A6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6n-7A0A075B6A6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Trav6n-7A0A075B6A6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6n-7A0A075B6A6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Trav6n-7A0A075B6A6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6n-7A0A075B6A6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6n-7A0A075B6A6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.57■□□□□ 0.56
Trav6n-7A0A075B6A6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6n-7A0A075B6A6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6n-7A0A075B6A6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trav6n-7A0A075B6A6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6n-7A0A075B6A6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6n-7A0A075B6A6 Gm10420-201ENSMUST00000121713 882 ntBASIC18.56■□□□□ 0.56
Trav6n-7A0A075B6A6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6n-7A0A075B6A6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6n-7A0A075B6A6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.56■□□□□ 0.56
Trav6n-7A0A075B6A6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6n-7A0A075B6A6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6n-7A0A075B6A6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6n-7A0A075B6A6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6n-7A0A075B6A6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6n-7A0A075B6A6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6n-7A0A075B6A6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6n-7A0A075B6A6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6n-7A0A075B6A6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6n-7A0A075B6A6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6n-7A0A075B6A6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trav6n-7A0A075B6A6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6n-7A0A075B6A6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trav6n-7A0A075B6A6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6n-7A0A075B6A6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.53■□□□□ 0.56
Trav6n-7A0A075B6A6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6n-7A0A075B6A6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trav6n-7A0A075B6A6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.53■□□□□ 0.56
Trav6n-7A0A075B6A6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.53■□□□□ 0.56
Trav6n-7A0A075B6A6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6n-7A0A075B6A6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6n-7A0A075B6A6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6n-7A0A075B6A6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav6n-7A0A075B6A6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav6n-7A0A075B6A6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav6n-7A0A075B6A6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trav6n-7A0A075B6A6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav6n-7A0A075B6A6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav6n-7A0A075B6A6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav6n-7A0A075B6A6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6n-7A0A075B6A6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6n-7A0A075B6A6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6n-7A0A075B6A6 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.51■□□□□ 0.55
Trav6n-7A0A075B6A6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trav6n-7A0A075B6A6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6n-7A0A075B6A6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trav6n-7A0A075B6A6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6n-7A0A075B6A6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6n-7A0A075B6A6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6n-7A0A075B6A6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6n-7A0A075B6A6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6n-7A0A075B6A6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6n-7A0A075B6A6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trav6n-7A0A075B6A6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6n-7A0A075B6A6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.49■□□□□ 0.55
Trav6n-7A0A075B6A6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trav6n-7A0A075B6A6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6n-7A0A075B6A6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6n-7A0A075B6A6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.49■□□□□ 0.55
Trav6n-7A0A075B6A6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms