Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav12d-3A0A075B6A4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav12d-3A0A075B6A4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12d-3A0A075B6A4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12d-3A0A075B6A4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.47■□□□□ 0.23
Trav12d-3A0A075B6A4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12d-3A0A075B6A4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav12d-3A0A075B6A4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12d-3A0A075B6A4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12d-3A0A075B6A4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12d-3A0A075B6A4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12d-3A0A075B6A4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12d-3A0A075B6A4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12d-3A0A075B6A4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12d-3A0A075B6A4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12d-3A0A075B6A4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12d-3A0A075B6A4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav12d-3A0A075B6A4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12d-3A0A075B6A4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12d-3A0A075B6A4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12d-3A0A075B6A4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12d-3A0A075B6A4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12d-3A0A075B6A4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12d-3A0A075B6A4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Trav12d-3A0A075B6A4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12d-3A0A075B6A4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12d-3A0A075B6A4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav12d-3A0A075B6A4 Gm30023-201ENSMUST00000197970 889 ntBASIC16.44■□□□□ 0.22
Trav12d-3A0A075B6A4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav12d-3A0A075B6A4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav12d-3A0A075B6A4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12d-3A0A075B6A4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12d-3A0A075B6A4 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.43■□□□□ 0.22
Trav12d-3A0A075B6A4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav12d-3A0A075B6A4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12d-3A0A075B6A4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12d-3A0A075B6A4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12d-3A0A075B6A4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12d-3A0A075B6A4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12d-3A0A075B6A4 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.41■□□□□ 0.22
Trav12d-3A0A075B6A4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12d-3A0A075B6A4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12d-3A0A075B6A4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12d-3A0A075B6A4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Trav12d-3A0A075B6A4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trav12d-3A0A075B6A4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12d-3A0A075B6A4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Trav12d-3A0A075B6A4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav12d-3A0A075B6A4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12d-3A0A075B6A4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav12d-3A0A075B6A4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12d-3A0A075B6A4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12d-3A0A075B6A4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12d-3A0A075B6A4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.4■□□□□ 0.22
Trav12d-3A0A075B6A4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12d-3A0A075B6A4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav12d-3A0A075B6A4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12d-3A0A075B6A4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12d-3A0A075B6A4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12d-3A0A075B6A4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12d-3A0A075B6A4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
Trav12d-3A0A075B6A4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12d-3A0A075B6A4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav12d-3A0A075B6A4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12d-3A0A075B6A4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12d-3A0A075B6A4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12d-3A0A075B6A4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav12d-3A0A075B6A4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav12d-3A0A075B6A4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12d-3A0A075B6A4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12d-3A0A075B6A4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.37■□□□□ 0.21
Trav12d-3A0A075B6A4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12d-3A0A075B6A4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12d-3A0A075B6A4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12d-3A0A075B6A4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12d-3A0A075B6A4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12d-3A0A075B6A4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Trav12d-3A0A075B6A4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12d-3A0A075B6A4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12d-3A0A075B6A4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12d-3A0A075B6A4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12d-3A0A075B6A4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12d-3A0A075B6A4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12d-3A0A075B6A4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12d-3A0A075B6A4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav12d-3A0A075B6A4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12d-3A0A075B6A4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-3A0A075B6A4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trav12d-3A0A075B6A4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav12d-3A0A075B6A4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-3A0A075B6A4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-3A0A075B6A4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trav12d-3A0A075B6A4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-3A0A075B6A4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12d-3A0A075B6A4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12d-3A0A075B6A4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12d-3A0A075B6A4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav12d-3A0A075B6A4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12d-3A0A075B6A4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav12d-3A0A075B6A4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms