Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav5-4A0A075B652 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav5-4A0A075B652 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav5-4A0A075B652 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trav5-4A0A075B652 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav5-4A0A075B652 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.17■□□□□ 0.5
Trav5-4A0A075B652 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav5-4A0A075B652 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Trav5-4A0A075B652 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav5-4A0A075B652 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.17■□□□□ 0.5
Trav5-4A0A075B652 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav5-4A0A075B652 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Trav5-4A0A075B652 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav5-4A0A075B652 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav5-4A0A075B652 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav5-4A0A075B652 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Trav5-4A0A075B652 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.16■□□□□ 0.5
Trav5-4A0A075B652 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav5-4A0A075B652 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trav5-4A0A075B652 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav5-4A0A075B652 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav5-4A0A075B652 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.15■□□□□ 0.5
Trav5-4A0A075B652 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
Trav5-4A0A075B652 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav5-4A0A075B652 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav5-4A0A075B652 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav5-4A0A075B652 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav5-4A0A075B652 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav5-4A0A075B652 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav5-4A0A075B652 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.14■□□□□ 0.49
Trav5-4A0A075B652 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav5-4A0A075B652 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.14■□□□□ 0.49
Trav5-4A0A075B652 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trav5-4A0A075B652 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav5-4A0A075B652 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav5-4A0A075B652 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5-4A0A075B652 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trav5-4A0A075B652 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.13■□□□□ 0.49
Trav5-4A0A075B652 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5-4A0A075B652 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5-4A0A075B652 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.13■□□□□ 0.49
Trav5-4A0A075B652 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.12■□□□□ 0.49
Trav5-4A0A075B652 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav5-4A0A075B652 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav5-4A0A075B652 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav5-4A0A075B652 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav5-4A0A075B652 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav5-4A0A075B652 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav5-4A0A075B652 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav5-4A0A075B652 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav5-4A0A075B652 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav5-4A0A075B652 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trav5-4A0A075B652 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav5-4A0A075B652 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav5-4A0A075B652 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav5-4A0A075B652 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav5-4A0A075B652 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav5-4A0A075B652 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav5-4A0A075B652 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav5-4A0A075B652 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav5-4A0A075B652 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5-4A0A075B652 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5-4A0A075B652 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5-4A0A075B652 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5-4A0A075B652 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5-4A0A075B652 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Trav5-4A0A075B652 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5-4A0A075B652 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Trav5-4A0A075B652 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5-4A0A075B652 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5-4A0A075B652 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5-4A0A075B652 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5-4A0A075B652 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav5-4A0A075B652 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5-4A0A075B652 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5-4A0A075B652 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5-4A0A075B652 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.09■□□□□ 0.49
Trav5-4A0A075B652 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5-4A0A075B652 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5-4A0A075B652 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav5-4A0A075B652 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5-4A0A075B652 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav5-4A0A075B652 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Trav5-4A0A075B652 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav5-4A0A075B652 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav5-4A0A075B652 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav5-4A0A075B652 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav5-4A0A075B652 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav5-4A0A075B652 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.07■□□□□ 0.48
Trav5-4A0A075B652 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav5-4A0A075B652 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav5-4A0A075B652 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.07■□□□□ 0.48
Trav5-4A0A075B652 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trav5-4A0A075B652 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav5-4A0A075B652 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav5-4A0A075B652 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav5-4A0A075B652 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav5-4A0A075B652 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav5-4A0A075B652 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.06■□□□□ 0.48
Trav5-4A0A075B652 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms