Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav12-3A0A075B648 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav12-3A0A075B648 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav12-3A0A075B648 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12-3A0A075B648 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12-3A0A075B648 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12-3A0A075B648 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12-3A0A075B648 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12-3A0A075B648 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
Trav12-3A0A075B648 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12-3A0A075B648 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12-3A0A075B648 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12-3A0A075B648 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12-3A0A075B648 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav12-3A0A075B648 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12-3A0A075B648 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Trav12-3A0A075B648 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav12-3A0A075B648 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav12-3A0A075B648 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12-3A0A075B648 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12-3A0A075B648 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.08■□□□□ 0.16
Trav12-3A0A075B648 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav12-3A0A075B648 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12-3A0A075B648 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12-3A0A075B648 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12-3A0A075B648 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12-3A0A075B648 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav12-3A0A075B648 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav12-3A0A075B648 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav12-3A0A075B648 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav12-3A0A075B648 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav12-3A0A075B648 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav12-3A0A075B648 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav12-3A0A075B648 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trav12-3A0A075B648 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12-3A0A075B648 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12-3A0A075B648 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12-3A0A075B648 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12-3A0A075B648 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav12-3A0A075B648 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12-3A0A075B648 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav12-3A0A075B648 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav12-3A0A075B648 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav12-3A0A075B648 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav12-3A0A075B648 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav12-3A0A075B648 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav12-3A0A075B648 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12-3A0A075B648 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12-3A0A075B648 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12-3A0A075B648 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12-3A0A075B648 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav12-3A0A075B648 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12-3A0A075B648 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12-3A0A075B648 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12-3A0A075B648 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12-3A0A075B648 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12-3A0A075B648 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12-3A0A075B648 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12-3A0A075B648 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12-3A0A075B648 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav12-3A0A075B648 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12-3A0A075B648 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav12-3A0A075B648 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12-3A0A075B648 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12-3A0A075B648 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav12-3A0A075B648 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12-3A0A075B648 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12-3A0A075B648 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav12-3A0A075B648 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12-3A0A075B648 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12-3A0A075B648 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12-3A0A075B648 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12-3A0A075B648 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12-3A0A075B648 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12-3A0A075B648 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12-3A0A075B648 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12-3A0A075B648 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12-3A0A075B648 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12-3A0A075B648 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
Trav12-3A0A075B648 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
Trav12-3A0A075B648 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Trav12-3A0A075B648 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12-3A0A075B648 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms