Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4n-4A0A075B615 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.27■□□□□ 0.04
Trav4n-4A0A075B615 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav4n-4A0A075B615 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav4n-4A0A075B615 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav4n-4A0A075B615 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav4n-4A0A075B615 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav4n-4A0A075B615 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav4n-4A0A075B615 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
Trav4n-4A0A075B615 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav4n-4A0A075B615 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.26■□□□□ 0.03
Trav4n-4A0A075B615 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav4n-4A0A075B615 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4n-4A0A075B615 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4n-4A0A075B615 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4n-4A0A075B615 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav4n-4A0A075B615 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4n-4A0A075B615 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4n-4A0A075B615 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Trav4n-4A0A075B615 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4n-4A0A075B615 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.25■□□□□ 0.03
Trav4n-4A0A075B615 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4n-4A0A075B615 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4n-4A0A075B615 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4n-4A0A075B615 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trav4n-4A0A075B615 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4n-4A0A075B615 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4n-4A0A075B615 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4n-4A0A075B615 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4n-4A0A075B615 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4n-4A0A075B615 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4n-4A0A075B615 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4n-4A0A075B615 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4n-4A0A075B615 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4n-4A0A075B615 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.24■□□□□ 0.03
Trav4n-4A0A075B615 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trav4n-4A0A075B615 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4n-4A0A075B615 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav4n-4A0A075B615 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4n-4A0A075B615 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4n-4A0A075B615 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav4n-4A0A075B615 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4n-4A0A075B615 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4n-4A0A075B615 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav4n-4A0A075B615 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4n-4A0A075B615 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4n-4A0A075B615 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav4n-4A0A075B615 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4n-4A0A075B615 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4n-4A0A075B615 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav4n-4A0A075B615 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4n-4A0A075B615 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav4n-4A0A075B615 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4n-4A0A075B615 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4n-4A0A075B615 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4n-4A0A075B615 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4n-4A0A075B615 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.22■□□□□ 0.03
Trav4n-4A0A075B615 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4n-4A0A075B615 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Trav4n-4A0A075B615 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4n-4A0A075B615 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4n-4A0A075B615 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4n-4A0A075B615 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4n-4A0A075B615 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4n-4A0A075B615 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4n-4A0A075B615 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4n-4A0A075B615 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4n-4A0A075B615 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav4n-4A0A075B615 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4n-4A0A075B615 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.21■□□□□ 0.02
Trav4n-4A0A075B615 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav4n-4A0A075B615 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Trav4n-4A0A075B615 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4n-4A0A075B615 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4n-4A0A075B615 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4n-4A0A075B615 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav4n-4A0A075B615 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC15.2■□□□□ 0.02
Trav4n-4A0A075B615 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4n-4A0A075B615 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4n-4A0A075B615 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav4n-4A0A075B615 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.2■□□□□ 0.02
Trav4n-4A0A075B615 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav4n-4A0A075B615 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4n-4A0A075B615 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.19■□□□□ 0.02
Trav4n-4A0A075B615 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4n-4A0A075B615 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav4n-4A0A075B615 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav4n-4A0A075B615 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4n-4A0A075B615 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4n-4A0A075B615 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4n-4A0A075B615 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4n-4A0A075B615 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav4n-4A0A075B615 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4n-4A0A075B615 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4n-4A0A075B615 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4n-4A0A075B615 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4n-4A0A075B615 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4n-4A0A075B615 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav4n-4A0A075B615 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4n-4A0A075B615 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms