Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9-1A0A075B601 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9-1A0A075B601 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav9-1A0A075B601 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav9-1A0A075B601 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.07■□□□□ 0.32
Trav9-1A0A075B601 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.07■□□□□ 0.32
Trav9-1A0A075B601 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9-1A0A075B601 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9-1A0A075B601 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9-1A0A075B601 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9-1A0A075B601 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9-1A0A075B601 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav9-1A0A075B601 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9-1A0A075B601 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9-1A0A075B601 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9-1A0A075B601 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9-1A0A075B601 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Trav9-1A0A075B601 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9-1A0A075B601 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.05■□□□□ 0.32
Trav9-1A0A075B601 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trav9-1A0A075B601 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav9-1A0A075B601 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9-1A0A075B601 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav9-1A0A075B601 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9-1A0A075B601 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav9-1A0A075B601 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav9-1A0A075B601 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.04■□□□□ 0.32
Trav9-1A0A075B601 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9-1A0A075B601 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9-1A0A075B601 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9-1A0A075B601 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav9-1A0A075B601 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9-1A0A075B601 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9-1A0A075B601 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9-1A0A075B601 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9-1A0A075B601 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trav9-1A0A075B601 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9-1A0A075B601 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9-1A0A075B601 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9-1A0A075B601 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9-1A0A075B601 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9-1A0A075B601 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9-1A0A075B601 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9-1A0A075B601 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Trav9-1A0A075B601 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9-1A0A075B601 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9-1A0A075B601 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9-1A0A075B601 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9-1A0A075B601 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9-1A0A075B601 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9-1A0A075B601 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9-1A0A075B601 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9-1A0A075B601 Gm28731-201ENSMUST00000185564 1569 ntBASIC17■□□□□ 0.31
Trav9-1A0A075B601 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9-1A0A075B601 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9-1A0A075B601 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav9-1A0A075B601 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9-1A0A075B601 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9-1A0A075B601 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9-1A0A075B601 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav9-1A0A075B601 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9-1A0A075B601 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav9-1A0A075B601 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.98■□□□□ 0.31
Trav9-1A0A075B601 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav9-1A0A075B601 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.98■□□□□ 0.31
Trav9-1A0A075B601 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav9-1A0A075B601 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.98■□□□□ 0.31
Trav9-1A0A075B601 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav9-1A0A075B601 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9-1A0A075B601 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.97■□□□□ 0.31
Trav9-1A0A075B601 Gm6311-201ENSMUST00000073790 878 ntBASIC16.97■□□□□ 0.31
Trav9-1A0A075B601 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trav9-1A0A075B601 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9-1A0A075B601 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9-1A0A075B601 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9-1A0A075B601 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trav9-1A0A075B601 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav9-1A0A075B601 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav9-1A0A075B601 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav9-1A0A075B601 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.96■□□□□ 0.31
Trav9-1A0A075B601 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Trav9-1A0A075B601 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav9-1A0A075B601 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Trav9-1A0A075B601 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trav9-1A0A075B601 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trav9-1A0A075B601 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Trav9-1A0A075B601 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav9-1A0A075B601 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9-1A0A075B601 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9-1A0A075B601 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.95■□□□□ 0.3
Trav9-1A0A075B601 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.95■□□□□ 0.3
Trav9-1A0A075B601 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9-1A0A075B601 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9-1A0A075B601 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9-1A0A075B601 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9-1A0A075B601 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trav9-1A0A075B601 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav9-1A0A075B601 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav9-1A0A075B601 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.94■□□□□ 0.3
Trav9-1A0A075B601 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms