Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-55A0A075B5W6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-55A0A075B5W6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-55A0A075B5W6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.31■□□□□ 0.36
Ighv1-55A0A075B5W6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-55A0A075B5W6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-55A0A075B5W6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ighv1-55A0A075B5W6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-55A0A075B5W6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-55A0A075B5W6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-55A0A075B5W6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-55A0A075B5W6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-55A0A075B5W6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-55A0A075B5W6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Ighv1-55A0A075B5W6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-55A0A075B5W6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Ighv1-55A0A075B5W6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-55A0A075B5W6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-55A0A075B5W6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-55A0A075B5W6 Gm14523-201ENSMUST00000117260 558 ntBASIC17.28■□□□□ 0.36
Ighv1-55A0A075B5W6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-55A0A075B5W6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Ighv1-55A0A075B5W6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-55A0A075B5W6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-55A0A075B5W6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-55A0A075B5W6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ighv1-55A0A075B5W6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-55A0A075B5W6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-55A0A075B5W6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.27■□□□□ 0.36
Ighv1-55A0A075B5W6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-55A0A075B5W6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-55A0A075B5W6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.27■□□□□ 0.36
Ighv1-55A0A075B5W6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-55A0A075B5W6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.27■□□□□ 0.35
Ighv1-55A0A075B5W6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-55A0A075B5W6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ighv1-55A0A075B5W6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.26■□□□□ 0.35
Ighv1-55A0A075B5W6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-55A0A075B5W6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.26■□□□□ 0.35
Ighv1-55A0A075B5W6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-55A0A075B5W6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.26■□□□□ 0.35
Ighv1-55A0A075B5W6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-55A0A075B5W6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.26■□□□□ 0.35
Ighv1-55A0A075B5W6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ighv1-55A0A075B5W6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-55A0A075B5W6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.25■□□□□ 0.35
Ighv1-55A0A075B5W6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-55A0A075B5W6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.25■□□□□ 0.35
Ighv1-55A0A075B5W6 Gm7332-201ENSMUST00000118351 454 ntBASIC17.25■□□□□ 0.35
Ighv1-55A0A075B5W6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-55A0A075B5W6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-55A0A075B5W6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-55A0A075B5W6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-55A0A075B5W6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-55A0A075B5W6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.24■□□□□ 0.35
Ighv1-55A0A075B5W6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ighv1-55A0A075B5W6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-55A0A075B5W6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ighv1-55A0A075B5W6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-55A0A075B5W6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-55A0A075B5W6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.23■□□□□ 0.35
Ighv1-55A0A075B5W6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.23■□□□□ 0.35
Ighv1-55A0A075B5W6 Gm12366-201ENSMUST00000121722 873 ntBASIC17.23■□□□□ 0.35
Ighv1-55A0A075B5W6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-55A0A075B5W6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.23■□□□□ 0.35
Ighv1-55A0A075B5W6 Gm22567-201ENSMUST00000175542 342 ntBASIC17.23■□□□□ 0.35
Ighv1-55A0A075B5W6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.23■□□□□ 0.35
Ighv1-55A0A075B5W6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-55A0A075B5W6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-55A0A075B5W6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.23■□□□□ 0.35
Ighv1-55A0A075B5W6 Gm5786-201ENSMUST00000085368 882 ntBASIC17.23■□□□□ 0.35
Ighv1-55A0A075B5W6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ighv1-55A0A075B5W6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-55A0A075B5W6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ighv1-55A0A075B5W6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ighv1-55A0A075B5W6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ighv1-55A0A075B5W6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-55A0A075B5W6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-55A0A075B5W6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-55A0A075B5W6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-55A0A075B5W6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-55A0A075B5W6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-55A0A075B5W6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-55A0A075B5W6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-55A0A075B5W6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-55A0A075B5W6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-55A0A075B5W6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-55A0A075B5W6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-55A0A075B5W6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-55A0A075B5W6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-55A0A075B5W6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-55A0A075B5W6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-55A0A075B5W6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-55A0A075B5W6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.21■□□□□ 0.35
Ighv1-55A0A075B5W6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.21■□□□□ 0.35
Ighv1-55A0A075B5W6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ighv1-55A0A075B5W6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-55A0A075B5W6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-55A0A075B5W6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-55A0A075B5W6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms