Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Gm27631-201ENSMUST00000184163 466 ntBASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Gm46209-201ENSMUST00000217912 553 ntBASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Gm16476-201ENSMUST00000221544 139 ntBASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Dupd1-202ENSMUST00000224735 548 ntBASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lhx9Q9WUH2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lhx9Q9WUH2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms