Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp4cQ9D7F7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Chmp4cQ9D7F7 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp4cQ9D7F7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp4cQ9D7F7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp4cQ9D7F7 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chmp4cQ9D7F7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.08■□□□□ 0.33
Chmp4cQ9D7F7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.08■□□□□ 0.33
Chmp4cQ9D7F7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Gm9727-201ENSMUST00000161387 555 ntBASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4cQ9D7F7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4cQ9D7F7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.06■□□□□ 0.32
Chmp4cQ9D7F7 Gm18206-201ENSMUST00000207027 926 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms