Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smurf1Q9CUN6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smurf1Q9CUN6 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smurf1Q9CUN6 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Smurf1Q9CUN6 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smurf1Q9CUN6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smurf1Q9CUN6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smurf1Q9CUN6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smurf1Q9CUN6 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smurf1Q9CUN6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smurf1Q9CUN6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Smurf1Q9CUN6 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smurf1Q9CUN6 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smurf1Q9CUN6 Gm45630-201ENSMUST00000210243 1911 ntBASIC13□□□□□ -0.33
Smurf1Q9CUN6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smurf1Q9CUN6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.99□□□□□ -0.33
Smurf1Q9CUN6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Mzt1-203ENSMUST00000227948 952 ntBASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Gm7461-201ENSMUST00000058918 827 ntBASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Smurf1Q9CUN6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smurf1Q9CUN6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smurf1Q9CUN6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smurf1Q9CUN6 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smurf1Q9CUN6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smurf1Q9CUN6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smurf1Q9CUN6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smurf1Q9CUN6 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smurf1Q9CUN6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smurf1Q9CUN6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smurf1Q9CUN6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smurf1Q9CUN6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smurf1Q9CUN6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smurf1Q9CUN6 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms