Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cldnd1Q9CQX5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cldnd1Q9CQX5 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.52□□□□□ -0.09
Cldnd1Q9CQX5 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cldnd1Q9CQX5 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cldnd1Q9CQX5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cldnd1Q9CQX5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cldnd1Q9CQX5 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.52□□□□□ -0.09
Cldnd1Q9CQX5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cldnd1Q9CQX5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cldnd1Q9CQX5 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Gm22331-201ENSMUST00000158066 136 ntBASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cldnd1Q9CQX5 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Gm12485-201ENSMUST00000119641 291 ntBASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Sybu-209ENSMUST00000228639 4113 ntBASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cldnd1Q9CQX5 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Gm8927-201ENSMUST00000181978 981 ntBASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Gm44608-201ENSMUST00000206827 855 ntBASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Gm3222-201ENSMUST00000071282 990 ntBASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms