Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Gm12428-201ENSMUST00000119844 727 ntBASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 AA543401-201ENSMUST00000164248 1269 ntBASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Gm27618-201ENSMUST00000183671 60 ntBASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Shd-206ENSMUST00000225145 998 ntBASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdha9Q91Y11 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Gm15920-201ENSMUST00000118998 402 ntBASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Mir1897-201ENSMUST00000122581 272 ntBASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdha9Q91Y11 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms