Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Gm2451-201ENSMUST00000199447 999 ntBASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Gm10290-201ENSMUST00000200451 999 ntBASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Gm34701-201ENSMUST00000204213 849 ntBASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 AC153544.1-201ENSMUST00000217988 400 ntBASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Gm4803-201ENSMUST00000218729 1279 ntBASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 AC174797.4-201ENSMUST00000225510 347 ntBASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.05□□□□□ -0.16
Pcdhb20Q91XZ9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Gm8185-201ENSMUST00000160999 669 ntBASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Gm20854-202ENSMUST00000181549 1156 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Mir6956-201ENSMUST00000183598 62 ntBASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Gm5779-201ENSMUST00000218467 910 ntBASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb20Q91XZ9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 Gm14833-201ENSMUST00000118345 1027 ntBASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 Gm9506-201ENSMUST00000118516 320 ntBASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 Gm13744-201ENSMUST00000118953 850 ntBASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 Gm11637-201ENSMUST00000120601 592 ntBASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 Gm22175-201ENSMUST00000175007 78 ntBASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Pcdhb20Q91XZ9 Gm29036-201ENSMUST00000189967 877 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms