Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Gm33320-201ENSMUST00000192232 530 ntBASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpp40Q8R1F9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Gm14719-201ENSMUST00000121891 340 ntBASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpp40Q8R1F9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpp40Q8R1F9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpp40Q8R1F9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpp40Q8R1F9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpp40Q8R1F9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpp40Q8R1F9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Rpp40Q8R1F9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpp40Q8R1F9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rpp40Q8R1F9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpp40Q8R1F9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Gm44608-201ENSMUST00000206827 855 ntBASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpp40Q8R1F9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Gm15460-201ENSMUST00000118147 391 ntBASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms