Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf4Q8K4J2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ebf4Q8K4J2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf4Q8K4J2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf4Q8K4J2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf4Q8K4J2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf4Q8K4J2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf4Q8K4J2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ebf4Q8K4J2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.02□□□□□ -0.33
Ebf4Q8K4J2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf4Q8K4J2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf4Q8K4J2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms