Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Gm22175-201ENSMUST00000175007 78 ntBASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 AA619741-201ENSMUST00000195095 646 ntBASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtn1Q8K0T0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Dupd1-202ENSMUST00000224735 548 ntBASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtn1Q8K0T0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Gm24543-201ENSMUST00000103867 82 ntBASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Gm15957-201ENSMUST00000118893 974 ntBASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Gm27430-201ENSMUST00000184585 107 ntBASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Gm44333-201ENSMUST00000197168 107 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms