Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rftn2Q8CHX7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rftn2Q8CHX7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 Gm19220-201ENSMUST00000222682 803 ntBASIC15.1■□□□□ 0.01
Rftn2Q8CHX7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms