Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtp1Q8C8C1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtp1Q8C8C1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Rtp1Q8C8C1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtp1Q8C8C1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtp1Q8C8C1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Gm5425-201ENSMUST00000214125 459 ntBASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Gm17383-201ENSMUST00000078739 1041 ntBASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Gm24526-201ENSMUST00000082921 158 ntBASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtp1Q8C8C1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Gm10275-202ENSMUST00000168697 495 ntBASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Gm37466-201ENSMUST00000195692 652 ntBASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Gm45880-201ENSMUST00000213041 853 ntBASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Gm10275-201ENSMUST00000092620 635 ntBASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rtp1Q8C8C1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Gm43822-201ENSMUST00000200285 476 ntBASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Gm19078-201ENSMUST00000206311 727 ntBASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Gm9823-201ENSMUST00000051212 327 ntBASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Gm10012-201ENSMUST00000078252 192 ntBASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Rtp1Q8C8C1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtp1Q8C8C1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtp1Q8C8C1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtp1Q8C8C1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtp1Q8C8C1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rtp1Q8C8C1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtp1Q8C8C1 Efs-202ENSMUST00000227037 2540 ntBASIC16.16■□□□□ 0.18
Rtp1Q8C8C1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.16■□□□□ 0.18
Rtp1Q8C8C1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtp1Q8C8C1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtp1Q8C8C1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtp1Q8C8C1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtp1Q8C8C1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms