Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 AA543401-201ENSMUST00000164248 1269 ntBASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Gm27680-201ENSMUST00000184192 160 ntBASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Gm27321-201ENSMUST00000185021 205 ntBASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.69■□□□□ 0.26
Usp44Q8C2S0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Gm6888-201ENSMUST00000221983 706 ntBASIC16.69■□□□□ 0.26
Usp44Q8C2S0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp44Q8C2S0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp44Q8C2S0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Mir6956-201ENSMUST00000183598 62 ntBASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp44Q8C2S0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp44Q8C2S0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms