Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Gm14719-201ENSMUST00000121891 340 ntBASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim47Q8C0E3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Gm29667-201ENSMUST00000190817 490 ntBASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.8■□□□□ 0.12
Trim47Q8C0E3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.8■□□□□ 0.12
Trim47Q8C0E3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Gm3436-201ENSMUST00000179930 840 ntBASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Gm27838-201ENSMUST00000184829 128 ntBASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms