Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp43Q8BUM9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp43Q8BUM9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp43Q8BUM9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Usp43Q8BUM9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 BC001981-202ENSMUST00000191393 1545 ntBASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Gm15957-201ENSMUST00000118893 974 ntBASIC14.47□□□□□ -0.09
Usp43Q8BUM9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Gm27631-201ENSMUST00000184163 466 ntBASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Gm5312-201ENSMUST00000203728 547 ntBASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Usp43Q8BUM9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp43Q8BUM9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Gm5566-201ENSMUST00000116118 459 ntBASIC14.46□□□□□ -0.09
Usp43Q8BUM9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Gm8584-201ENSMUST00000171982 758 ntBASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Gm10253-201ENSMUST00000194270 940 ntBASIC14.46□□□□□ -0.09
Usp43Q8BUM9 AA619741-201ENSMUST00000195095 646 ntBASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Usp43Q8BUM9 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Gm8396-201ENSMUST00000057361 823 ntBASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp43Q8BUM9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp43Q8BUM9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp43Q8BUM9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Usp43Q8BUM9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp43Q8BUM9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Gm9719-201ENSMUST00000162765 543 ntBASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Gm45453-201ENSMUST00000211758 853 ntBASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms