Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Gm9103-201ENSMUST00000119371 405 ntBASIC11.69□□□□□ -0.54
Tgfbr1Q64729 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tgfbr1Q64729 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Gm11764-201ENSMUST00000120221 623 ntBASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tgfbr1Q64729 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tgfbr1Q64729 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tgfbr1Q64729 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Tgfbr1Q64729 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tgfbr1Q64729 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tgfbr1Q64729 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tgfbr1Q64729 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tgfbr1Q64729 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tgfbr1Q64729 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms