Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim27Q62158 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim27Q62158 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim27Q62158 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim27Q62158 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim27Q62158 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim27Q62158 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim27Q62158 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim27Q62158 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Trim27Q62158 Gm6415-201ENSMUST00000118488 348 ntBASIC17.53■□□□□ 0.4
Trim27Q62158 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim27Q62158 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim27Q62158 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim27Q62158 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim27Q62158 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim27Q62158 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim27Q62158 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim27Q62158 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim27Q62158 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trim27Q62158 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Trim27Q62158 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim27Q62158 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim27Q62158 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim27Q62158 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim27Q62158 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim27Q62158 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim27Q62158 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim27Q62158 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim27Q62158 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trim27Q62158 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim27Q62158 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
Trim27Q62158 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Trim27Q62158 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim27Q62158 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.52■□□□□ 0.4
Trim27Q62158 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim27Q62158 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim27Q62158 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim27Q62158 Gm44608-201ENSMUST00000206827 855 ntBASIC17.52■□□□□ 0.4
Trim27Q62158 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trim27Q62158 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim27Q62158 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trim27Q62158 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim27Q62158 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Trim27Q62158 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.52■□□□□ 0.39
Trim27Q62158 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim27Q62158 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim27Q62158 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trim27Q62158 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trim27Q62158 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Trim27Q62158 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim27Q62158 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim27Q62158 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Gm16476-201ENSMUST00000221544 139 ntBASIC17.51■□□□□ 0.39
Trim27Q62158 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trim27Q62158 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim27Q62158 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim27Q62158 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim27Q62158 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim27Q62158 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim27Q62158 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim27Q62158 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim27Q62158 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim27Q62158 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim27Q62158 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim27Q62158 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim27Q62158 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trim27Q62158 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.5■□□□□ 0.39
Trim27Q62158 Gm25948-201ENSMUST00000175334 112 ntBASIC17.5■□□□□ 0.39
Trim27Q62158 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim27Q62158 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim27Q62158 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim27Q62158 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC17.5■□□□□ 0.39
Trim27Q62158 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim27Q62158 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
Trim27Q62158 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim27Q62158 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim27Q62158 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.5■□□□□ 0.39
Trim27Q62158 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim27Q62158 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim27Q62158 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms