Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
ClpbQ60649 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.73□□□□□ -0.21
ClpbQ60649 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
ClpbQ60649 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.73□□□□□ -0.21
ClpbQ60649 Gm25948-201ENSMUST00000175334 112 ntBASIC13.73□□□□□ -0.21
ClpbQ60649 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.73□□□□□ -0.21
ClpbQ60649 Mir6956-201ENSMUST00000183598 62 ntBASIC13.73□□□□□ -0.21
ClpbQ60649 Gm27430-201ENSMUST00000184585 107 ntBASIC13.73□□□□□ -0.21
ClpbQ60649 Gm44333-201ENSMUST00000197168 107 ntBASIC13.73□□□□□ -0.21
ClpbQ60649 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.73□□□□□ -0.21
ClpbQ60649 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.73□□□□□ -0.21
ClpbQ60649 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.73□□□□□ -0.21
ClpbQ60649 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
ClpbQ60649 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ClpbQ60649 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ClpbQ60649 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
ClpbQ60649 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
ClpbQ60649 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.72□□□□□ -0.21
ClpbQ60649 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
ClpbQ60649 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ClpbQ60649 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
ClpbQ60649 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
ClpbQ60649 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.72□□□□□ -0.21
ClpbQ60649 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ClpbQ60649 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.72□□□□□ -0.21
ClpbQ60649 Gm9824-201ENSMUST00000178707 561 ntBASIC13.72□□□□□ -0.21
ClpbQ60649 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.72□□□□□ -0.21
ClpbQ60649 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.72□□□□□ -0.21
ClpbQ60649 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.72□□□□□ -0.21
ClpbQ60649 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ClpbQ60649 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ClpbQ60649 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ClpbQ60649 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ClpbQ60649 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ClpbQ60649 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ClpbQ60649 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
ClpbQ60649 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ClpbQ60649 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
ClpbQ60649 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ClpbQ60649 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.71□□□□□ -0.21
ClpbQ60649 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
ClpbQ60649 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
ClpbQ60649 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ClpbQ60649 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ClpbQ60649 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ClpbQ60649 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.71□□□□□ -0.21
ClpbQ60649 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ClpbQ60649 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
ClpbQ60649 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.71□□□□□ -0.21
ClpbQ60649 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.71□□□□□ -0.21
ClpbQ60649 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.71□□□□□ -0.21
ClpbQ60649 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ClpbQ60649 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ClpbQ60649 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ClpbQ60649 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ClpbQ60649 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ClpbQ60649 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpbQ60649 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms