Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm11803-201ENSMUST00000119966 444 ntBASIC14.26□□□□□ -0.13
Fam196aQ3USH1 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Gm26464-201ENSMUST00000157094 305 ntBASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Gm37008-201ENSMUST00000195712 319 ntBASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Gm42627-201ENSMUST00000197347 224 ntBASIC14.26□□□□□ -0.13
Fam196aQ3USH1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Gm12882-201ENSMUST00000121696 517 ntBASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Gm38341-201ENSMUST00000195357 515 ntBASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Gm43118-201ENSMUST00000199149 775 ntBASIC14.25□□□□□ -0.13
Fam196aQ3USH1 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fam196aQ3USH1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Gm44397-201ENSMUST00000195950 113 ntBASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fam196aQ3USH1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fam196aQ3USH1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fam196aQ3USH1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fam196aQ3USH1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fam196aQ3USH1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Fam196aQ3USH1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fam196aQ3USH1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms