Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC19.49■□□□□ 0.71
Puf60Q3UEB3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Puf60Q3UEB3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Gm29340-201ENSMUST00000188763 3854 ntBASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Mir1894-201ENSMUST00000122802 81 ntBASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC19.48■□□□□ 0.71
Puf60Q3UEB3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Puf60Q3UEB3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Puf60Q3UEB3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Puf60Q3UEB3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Puf60Q3UEB3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Puf60Q3UEB3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Puf60Q3UEB3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Puf60Q3UEB3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Puf60Q3UEB3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Puf60Q3UEB3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Puf60Q3UEB3 Gm12390-201ENSMUST00000117897 397 ntBASIC19.47■□□□□ 0.71
Puf60Q3UEB3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC19.47■□□□□ 0.71
Puf60Q3UEB3 Gm24420-201ENSMUST00000176676 59 ntBASIC19.47■□□□□ 0.71
Puf60Q3UEB3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC19.47■□□□□ 0.71
Puf60Q3UEB3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Puf60Q3UEB3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Puf60Q3UEB3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Puf60Q3UEB3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Puf60Q3UEB3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Puf60Q3UEB3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Gm4984-201ENSMUST00000115987 360 ntBASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Gm15429-201ENSMUST00000151268 798 ntBASIC19.46■□□□□ 0.71
Puf60Q3UEB3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 AC110817.1-201ENSMUST00000225706 605 ntBASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Puf60Q3UEB3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Gm13689-201ENSMUST00000119360 685 ntBASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Gm27839-201ENSMUST00000184242 106 ntBASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Puf60Q3UEB3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms