Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim63Q38HM4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim63Q38HM4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim63Q38HM4 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim63Q38HM4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.77□□□□□ -0.53
Trim63Q38HM4 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trim63Q38HM4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Trim63Q38HM4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim63Q38HM4 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim63Q38HM4 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim63Q38HM4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim63Q38HM4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Trim63Q38HM4 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.76□□□□□ -0.53
Trim63Q38HM4 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Gm42642-201ENSMUST00000200683 355 ntBASIC11.76□□□□□ -0.53
Trim63Q38HM4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim63Q38HM4 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.76□□□□□ -0.53
Trim63Q38HM4 Rab3c-203ENSMUST00000224180 967 ntBASIC11.76□□□□□ -0.53
Trim63Q38HM4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.76□□□□□ -0.53
Trim63Q38HM4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim63Q38HM4 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Trim63Q38HM4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.75□□□□□ -0.53
Trim63Q38HM4 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Gm42555-201ENSMUST00000199304 1039 ntBASIC11.75□□□□□ -0.53
Trim63Q38HM4 AV356131-201ENSMUST00000206201 750 ntBASIC11.75□□□□□ -0.53
Trim63Q38HM4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.75□□□□□ -0.53
Trim63Q38HM4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim63Q38HM4 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.74□□□□□ -0.53
Trim63Q38HM4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim63Q38HM4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.74□□□□□ -0.53
Trim63Q38HM4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.74□□□□□ -0.53
Trim63Q38HM4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC11.74□□□□□ -0.53
Trim63Q38HM4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim63Q38HM4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms