Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Atf4Q06507 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atf4Q06507 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Atf4Q06507 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atf4Q06507 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.7□□□□□ -0.22
Atf4Q06507 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.7□□□□□ -0.22
Atf4Q06507 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atf4Q06507 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Atf4Q06507 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atf4Q06507 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Atf4Q06507 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Atf4Q06507 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.69□□□□□ -0.22
Atf4Q06507 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Atf4Q06507 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.69□□□□□ -0.22
Atf4Q06507 Gm28630-201ENSMUST00000187806 498 ntBASIC13.69□□□□□ -0.22
Atf4Q06507 Gm29541-201ENSMUST00000191351 678 ntBASIC13.69□□□□□ -0.22
Atf4Q06507 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.69□□□□□ -0.22
Atf4Q06507 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Gm9794-201ENSMUST00000202370 423 ntBASIC13.69□□□□□ -0.22
Atf4Q06507 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.69□□□□□ -0.22
Atf4Q06507 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC13.69□□□□□ -0.22
Atf4Q06507 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.69□□□□□ -0.22
Atf4Q06507 Gm9063-201ENSMUST00000223299 582 ntBASIC13.69□□□□□ -0.22
Atf4Q06507 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.69□□□□□ -0.22
Atf4Q06507 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.69□□□□□ -0.22
Atf4Q06507 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Atf4Q06507 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Atf4Q06507 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atf4Q06507 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.69□□□□□ -0.22
Atf4Q06507 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Atf4Q06507 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Atf4Q06507 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Atf4Q06507 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Atf4Q06507 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Atf4Q06507 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Gm14767-201ENSMUST00000121559 586 ntBASIC13.68□□□□□ -0.22
Atf4Q06507 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Atf4Q06507 Gm27680-201ENSMUST00000184192 160 ntBASIC13.68□□□□□ -0.22
Atf4Q06507 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.68□□□□□ -0.22
Atf4Q06507 Gm45071-201ENSMUST00000205353 571 ntBASIC13.68□□□□□ -0.22
Atf4Q06507 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.68□□□□□ -0.22
Atf4Q06507 CT025552.1-201ENSMUST00000224561 521 ntBASIC13.68□□□□□ -0.22
Atf4Q06507 AC132881.2-201ENSMUST00000225474 709 ntBASIC13.68□□□□□ -0.22
Atf4Q06507 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Atf4Q06507 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.68□□□□□ -0.22
Atf4Q06507 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atf4Q06507 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atf4Q06507 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atf4Q06507 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Atf4Q06507 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Atf4Q06507 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.67□□□□□ -0.22
Atf4Q06507 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Atf4Q06507 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.67□□□□□ -0.22
Atf4Q06507 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms