Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cacna1aP97445 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cacna1aP97445 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.15□□□□□ -0.3
Cacna1aP97445 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cacna1aP97445 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cacna1aP97445 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cacna1aP97445 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.15□□□□□ -0.3
Cacna1aP97445 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cacna1aP97445 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.15□□□□□ -0.3
Cacna1aP97445 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.15□□□□□ -0.3
Cacna1aP97445 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cacna1aP97445 Gm24526-201ENSMUST00000082921 158 ntBASIC13.15□□□□□ -0.3
Cacna1aP97445 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cacna1aP97445 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cacna1aP97445 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cacna1aP97445 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.15□□□□□ -0.3
Cacna1aP97445 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cacna1aP97445 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.15□□□□□ -0.3
Cacna1aP97445 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cacna1aP97445 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cacna1aP97445 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Cacna1aP97445 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.15□□□□□ -0.3
Cacna1aP97445 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cacna1aP97445 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cacna1aP97445 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.15□□□□□ -0.3
Cacna1aP97445 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cacna1aP97445 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.15□□□□□ -0.3
Cacna1aP97445 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.15□□□□□ -0.3
Cacna1aP97445 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.15□□□□□ -0.3
Cacna1aP97445 Gm6916-202ENSMUST00000205523 195 ntBASIC13.15□□□□□ -0.3
Cacna1aP97445 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.15□□□□□ -0.3
Cacna1aP97445 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cacna1aP97445 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.15□□□□□ -0.3
Cacna1aP97445 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cacna1aP97445 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cacna1aP97445 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cacna1aP97445 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
Cacna1aP97445 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.15□□□□□ -0.31
Cacna1aP97445 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Gm23931-201ENSMUST00000103842 109 ntBASIC13.14□□□□□ -0.31
Cacna1aP97445 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.14□□□□□ -0.31
Cacna1aP97445 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.14□□□□□ -0.31
Cacna1aP97445 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Cacna1aP97445 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.14□□□□□ -0.31
Cacna1aP97445 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cacna1aP97445 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cacna1aP97445 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.14□□□□□ -0.31
Cacna1aP97445 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cacna1aP97445 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Gm8749-201ENSMUST00000117737 331 ntBASIC13.14□□□□□ -0.31
Cacna1aP97445 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.14□□□□□ -0.31
Cacna1aP97445 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.14□□□□□ -0.31
Cacna1aP97445 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.14□□□□□ -0.31
Cacna1aP97445 Gm9182-201ENSMUST00000217829 639 ntBASIC13.14□□□□□ -0.31
Cacna1aP97445 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.14□□□□□ -0.31
Cacna1aP97445 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.14□□□□□ -0.31
Cacna1aP97445 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.14□□□□□ -0.31
Cacna1aP97445 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Cacna1aP97445 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1aP97445 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1aP97445 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1aP97445 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.13□□□□□ -0.31
Cacna1aP97445 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1aP97445 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1aP97445 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1aP97445 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1aP97445 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1aP97445 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1aP97445 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1aP97445 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1aP97445 Gm37714-201ENSMUST00000194742 342 ntBASIC13.13□□□□□ -0.31
Cacna1aP97445 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.13□□□□□ -0.31
Cacna1aP97445 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.13□□□□□ -0.31
Cacna1aP97445 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.13□□□□□ -0.31
Cacna1aP97445 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1aP97445 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1aP97445 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1aP97445 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms