Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.73■□□□□ 0.75
Stra8P70278 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Stra8P70278 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Stra8P70278 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC19.73■□□□□ 0.75
Stra8P70278 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Stra8P70278 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Stra8P70278 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Stra8P70278 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC19.73■□□□□ 0.75
Stra8P70278 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Stra8P70278 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Stra8P70278 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Stra8P70278 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Stra8P70278 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Stra8P70278 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Stra8P70278 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Stra8P70278 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.72■□□□□ 0.75
Stra8P70278 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Stra8P70278 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.72■□□□□ 0.75
Stra8P70278 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Stra8P70278 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Stra8P70278 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.72■□□□□ 0.75
Stra8P70278 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Stra8P70278 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC19.72■□□□□ 0.75
Stra8P70278 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Stra8P70278 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 Gm42872-201ENSMUST00000200026 1967 ntBASIC19.72■□□□□ 0.75
Stra8P70278 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Stra8P70278 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC19.71■□□□□ 0.75
Stra8P70278 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Stra8P70278 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.71■□□□□ 0.75
Stra8P70278 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Stra8P70278 Gm11779-201ENSMUST00000118541 368 ntBASIC19.71■□□□□ 0.75
Stra8P70278 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Stra8P70278 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Stra8P70278 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Stra8P70278 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Stra8P70278 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Stra8P70278 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Stra8P70278 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Stra8P70278 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stra8P70278 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Stra8P70278 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stra8P70278 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Stra8P70278 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stra8P70278 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stra8P70278 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC19.7■□□□□ 0.74
Stra8P70278 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stra8P70278 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Stra8P70278 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stra8P70278 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stra8P70278 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Stra8P70278 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stra8P70278 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stra8P70278 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stra8P70278 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Stra8P70278 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stra8P70278 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stra8P70278 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stra8P70278 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stra8P70278 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stra8P70278 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stra8P70278 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stra8P70278 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stra8P70278 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Stra8P70278 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stra8P70278 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Stra8P70278 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms