Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vamp3P63024 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Vamp3P63024 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vamp3P63024 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vamp3P63024 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.9□□□□□ -0.66
Vamp3P63024 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vamp3P63024 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vamp3P63024 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Vamp3P63024 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.89□□□□□ -0.67
Vamp3P63024 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Vamp3P63024 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.89□□□□□ -0.67
Vamp3P63024 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC10.89□□□□□ -0.67
Vamp3P63024 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC10.89□□□□□ -0.67
Vamp3P63024 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.89□□□□□ -0.67
Vamp3P63024 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC10.89□□□□□ -0.67
Vamp3P63024 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Rab3c-203ENSMUST00000224180 967 ntBASIC10.89□□□□□ -0.67
Vamp3P63024 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Vamp3P63024 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Vamp3P63024 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Vamp3P63024 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Vamp3P63024 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vamp3P63024 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Vamp3P63024 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.88□□□□□ -0.67
Vamp3P63024 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Vamp3P63024 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.88□□□□□ -0.67
Vamp3P63024 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Mir6404-201ENSMUST00000183699 94 ntBASIC10.88□□□□□ -0.67
Vamp3P63024 Gm2559-201ENSMUST00000201323 363 ntBASIC10.88□□□□□ -0.67
Vamp3P63024 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.88□□□□□ -0.67
Vamp3P63024 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Vamp3P63024 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Vamp3P63024 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.88□□□□□ -0.67
Vamp3P63024 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.88□□□□□ -0.67
Vamp3P63024 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Vamp3P63024 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vamp3P63024 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
Vamp3P63024 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vamp3P63024 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vamp3P63024 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vamp3P63024 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vamp3P63024 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vamp3P63024 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vamp3P63024 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Vamp3P63024 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vamp3P63024 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vamp3P63024 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vamp3P63024 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Vamp3P63024 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Vamp3P63024 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vamp3P63024 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Vamp3P63024 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Vamp3P63024 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms