Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gabra1P62812 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gabra1P62812 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.02□□□□□ -0.48
Gabra1P62812 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gabra1P62812 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gabra1P62812 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gabra1P62812 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Gabra1P62812 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.02□□□□□ -0.49
Gabra1P62812 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Gabra1P62812 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gabra1P62812 Gm10231-201ENSMUST00000181584 441 ntBASIC12.02□□□□□ -0.49
Gabra1P62812 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Gm10175-202ENSMUST00000208752 441 ntBASIC12.02□□□□□ -0.49
Gabra1P62812 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.02□□□□□ -0.49
Gabra1P62812 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Gabra1P62812 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Gabra1P62812 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Gabra1P62812 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.02□□□□□ -0.49
Gabra1P62812 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.02□□□□□ -0.49
Gabra1P62812 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.02□□□□□ -0.49
Gabra1P62812 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gabra1P62812 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gabra1P62812 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Gabra1P62812 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Gabra1P62812 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 Gm27742-201ENSMUST00000184667 60 ntBASIC12.01□□□□□ -0.49
Gabra1P62812 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.01□□□□□ -0.49
Gabra1P62812 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.01□□□□□ -0.49
Gabra1P62812 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gabra1P62812 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Gabra1P62812 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gabra1P62812 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gabra1P62812 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Gabra1P62812 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12□□□□□ -0.49
Gabra1P62812 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12□□□□□ -0.49
Gabra1P62812 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Gm27196-201ENSMUST00000184787 2582 ntBASIC12□□□□□ -0.49
Gabra1P62812 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12□□□□□ -0.49
Gabra1P62812 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12□□□□□ -0.49
Gabra1P62812 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Trav13-3-201ENSMUST00000117226 336 ntBASIC12□□□□□ -0.49
Gabra1P62812 Gm8097-201ENSMUST00000117903 829 ntBASIC12□□□□□ -0.49
Gabra1P62812 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Gabra1P62812 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Gabra1P62812 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Gabra1P62812 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gabra1P62812 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms