Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Gm9726-201ENSMUST00000180321 678 ntBASIC11.9□□□□□ -0.5
Lsm5P62322 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Lsm5P62322 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.9□□□□□ -0.5
Lsm5P62322 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lsm5P62322 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Lsm5P62322 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lsm5P62322 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.9□□□□□ -0.5
Lsm5P62322 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.9□□□□□ -0.5
Lsm5P62322 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lsm5P62322 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.9□□□□□ -0.5
Lsm5P62322 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Lsm5P62322 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Lsm5P62322 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
Lsm5P62322 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lsm5P62322 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Lsm5P62322 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm5P62322 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm5P62322 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.89□□□□□ -0.51
Lsm5P62322 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Gm29518-201ENSMUST00000190858 372 ntBASIC11.89□□□□□ -0.51
Lsm5P62322 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm5P62322 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm5P62322 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm5P62322 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Lsm5P62322 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.89□□□□□ -0.51
Lsm5P62322 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm5P62322 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lsm5P62322 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm5P62322 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Lsm5P62322 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm5P62322 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm5P62322 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm5P62322 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Lsm5P62322 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Lsm5P62322 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.88□□□□□ -0.51
Lsm5P62322 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm5P62322 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm5P62322 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Lsm5P62322 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm5P62322 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm5P62322 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm5P62322 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm5P62322 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm5P62322 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.88□□□□□ -0.51
Lsm5P62322 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm5P62322 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Lsm5P62322 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm5P62322 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm5P62322 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm5P62322 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm5P62322 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Lsm5P62322 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Lsm5P62322 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Lsm5P62322 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Lsm5P62322 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm5P62322 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms