Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.5□□□□□ -0.09
Sox1P53783 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Sox1P53783 Gm2991-201ENSMUST00000173338 480 ntBASIC14.5□□□□□ -0.09
Sox1P53783 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.5□□□□□ -0.09
Sox1P53783 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Sox1P53783 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.5□□□□□ -0.09
Sox1P53783 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.5□□□□□ -0.09
Sox1P53783 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Sox1P53783 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Sox1P53783 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sox1P53783 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sox1P53783 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox1P53783 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.49□□□□□ -0.09
Sox1P53783 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Sox1P53783 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.49□□□□□ -0.09
Sox1P53783 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Sox1P53783 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.49□□□□□ -0.09
Sox1P53783 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 Mir5120-201ENSMUST00000175020 78 ntBASIC14.49□□□□□ -0.09
Sox1P53783 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.49□□□□□ -0.09
Sox1P53783 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
Sox1P53783 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Sox1P53783 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.49□□□□□ -0.09
Sox1P53783 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.49□□□□□ -0.09
Sox1P53783 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.49□□□□□ -0.09
Sox1P53783 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sox1P53783 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.49□□□□□ -0.09
Sox1P53783 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox1P53783 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.48□□□□□ -0.09
Sox1P53783 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Sox1P53783 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.48□□□□□ -0.09
Sox1P53783 Gm26464-201ENSMUST00000157094 305 ntBASIC14.48□□□□□ -0.09
Sox1P53783 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.48□□□□□ -0.09
Sox1P53783 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.48□□□□□ -0.09
Sox1P53783 Proscos-202ENSMUST00000178990 666 ntBASIC14.48□□□□□ -0.09
Sox1P53783 Gm6621-201ENSMUST00000193251 772 ntBASIC14.48□□□□□ -0.09
Sox1P53783 Olfr286-202ENSMUST00000205305 969 ntBASIC14.48□□□□□ -0.09
Sox1P53783 Gm18905-201ENSMUST00000205454 928 ntBASIC14.48□□□□□ -0.09
Sox1P53783 Gm10608-202ENSMUST00000213924 676 ntBASIC14.48□□□□□ -0.09
Sox1P53783 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.48□□□□□ -0.09
Sox1P53783 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Sox1P53783 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.48□□□□□ -0.09
Sox1P53783 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Sox1P53783 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox1P53783 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sox1P53783 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox1P53783 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms