Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxb3P09026 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxb3P09026 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxb3P09026 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Hoxb3P09026 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxb3P09026 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxb3P09026 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxb3P09026 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxb3P09026 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxb3P09026 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxb3P09026 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxb3P09026 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxb3P09026 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxb3P09026 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxb3P09026 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxb3P09026 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hoxb3P09026 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxb3P09026 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hoxb3P09026 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Hoxb3P09026 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxb3P09026 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxb3P09026 Gm26083-201ENSMUST00000157904 193 ntBASIC14.17□□□□□ -0.14
Hoxb3P09026 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxb3P09026 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxb3P09026 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.17□□□□□ -0.14
Hoxb3P09026 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.17□□□□□ -0.14
Hoxb3P09026 Gm7783-201ENSMUST00000204795 781 ntBASIC14.17□□□□□ -0.14
Hoxb3P09026 Gm6013-201ENSMUST00000212264 699 ntBASIC14.17□□□□□ -0.14
Hoxb3P09026 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.17□□□□□ -0.14
Hoxb3P09026 AC106830.1-201ENSMUST00000228032 1003 ntBASIC14.17□□□□□ -0.14
Hoxb3P09026 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxb3P09026 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.17□□□□□ -0.14
Hoxb3P09026 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.17□□□□□ -0.14
Hoxb3P09026 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hoxb3P09026 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxb3P09026 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.17□□□□□ -0.14
Hoxb3P09026 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxb3P09026 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.17□□□□□ -0.14
Hoxb3P09026 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.17□□□□□ -0.14
Hoxb3P09026 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hoxb3P09026 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxb3P09026 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxb3P09026 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxb3P09026 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxb3P09026 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxb3P09026 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxb3P09026 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxb3P09026 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxb3P09026 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxb3P09026 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxb3P09026 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxb3P09026 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hoxb3P09026 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hoxb3P09026 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxb3P09026 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxb3P09026 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Hoxb3P09026 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.16□□□□□ -0.14
Hoxb3P09026 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hoxb3P09026 Gm5356-201ENSMUST00000093326 615 ntBASIC14.16□□□□□ -0.14
Hoxb3P09026 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.16□□□□□ -0.14
Hoxb3P09026 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxb3P09026 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxb3P09026 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxb3P09026 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxb3P09026 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.15□□□□□ -0.14
Hoxb3P09026 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hoxb3P09026 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.15□□□□□ -0.14
Hoxb3P09026 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.15□□□□□ -0.14
Hoxb3P09026 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.15□□□□□ -0.14
Hoxb3P09026 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hoxb3P09026 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hoxb3P09026 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.15□□□□□ -0.14
Hoxb3P09026 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.15□□□□□ -0.14
Hoxb3P09026 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.15□□□□□ -0.14
Hoxb3P09026 Gm10766-202ENSMUST00000194123 606 ntBASIC14.15□□□□□ -0.14
Hoxb3P09026 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hoxb3P09026 Mir125a-201ENSMUST00000083545 68 ntBASIC14.15□□□□□ -0.14
Hoxb3P09026 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxb3P09026 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms