Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01852 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
P01852 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01852 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01852 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01852 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
P01852 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01852 Gm6415-201ENSMUST00000118488 348 ntBASIC13.07□□□□□ -0.32
P01852 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.07□□□□□ -0.32
P01852 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01852 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01852 Gm23547-201ENSMUST00000158210 271 ntBASIC13.07□□□□□ -0.32
P01852 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
P01852 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01852 Gm29541-201ENSMUST00000191351 678 ntBASIC13.07□□□□□ -0.32
P01852 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01852 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
P01852 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.07□□□□□ -0.32
P01852 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.07□□□□□ -0.32
P01852 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
P01852 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
P01852 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
P01852 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01852 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
P01852 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.07□□□□□ -0.32
P01852 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
P01852 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P01852 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.07□□□□□ -0.32
P01852 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.07□□□□□ -0.32
P01852 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.07□□□□□ -0.32
P01852 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
P01852 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.06□□□□□ -0.32
P01852 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
P01852 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Gm18766-201ENSMUST00000189811 808 ntBASIC13.06□□□□□ -0.32
P01852 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
P01852 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.06□□□□□ -0.32
P01852 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.06□□□□□ -0.32
P01852 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
P01852 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.06□□□□□ -0.32
P01852 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
P01852 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.06□□□□□ -0.32
P01852 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01852 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.05□□□□□ -0.32
P01852 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
P01852 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01852 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01852 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01852 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P01852 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.05□□□□□ -0.32
P01852 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01852 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01852 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
P01852 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
P01852 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.05□□□□□ -0.32
P01852 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
P01852 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01852 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01852 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
P01852 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01852 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01852 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01852 Gm13823-201ENSMUST00000119930 345 ntBASIC13.05□□□□□ -0.32
P01852 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P01852 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.05□□□□□ -0.32
P01852 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01852 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.05□□□□□ -0.32
P01852 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P01852 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.05□□□□□ -0.32
P01852 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P01852 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01852 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
P01852 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
P01852 Gm29310-201ENSMUST00000185468 696 ntBASIC13.05□□□□□ -0.32
P01852 Gm21825-201ENSMUST00000185728 696 ntBASIC13.05□□□□□ -0.32
P01852 Gm29109-201ENSMUST00000185895 696 ntBASIC13.05□□□□□ -0.32
P01852 Gm21896-201ENSMUST00000186520 696 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms