Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
TcraP01849 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.44□□□□□ -0.74
TcraP01849 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.44□□□□□ -0.74
TcraP01849 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
TcraP01849 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.43□□□□□ -0.74
TcraP01849 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
TcraP01849 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.43□□□□□ -0.74
TcraP01849 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
TcraP01849 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC10.43□□□□□ -0.74
TcraP01849 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.43□□□□□ -0.74
TcraP01849 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
TcraP01849 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC10.43□□□□□ -0.74
TcraP01849 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC10.43□□□□□ -0.74
TcraP01849 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
TcraP01849 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
TcraP01849 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
TcraP01849 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TcraP01849 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.42□□□□□ -0.74
TcraP01849 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
TcraP01849 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.42□□□□□ -0.74
TcraP01849 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 AC126250.1-201ENSMUST00000228343 1768 ntBASIC10.42□□□□□ -0.74
TcraP01849 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC10.42□□□□□ -0.74
TcraP01849 Olfr129-201ENSMUST00000122318 993 ntBASIC10.42□□□□□ -0.74
TcraP01849 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC10.42□□□□□ -0.74
TcraP01849 AC108846.1-201ENSMUST00000214531 513 ntBASIC10.42□□□□□ -0.74
TcraP01849 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
TcraP01849 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.42□□□□□ -0.74
TcraP01849 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.42□□□□□ -0.74
TcraP01849 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
TcraP01849 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.42□□□□□ -0.74
TcraP01849 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
TcraP01849 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms