Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Hcn1O88704 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hcn1O88704 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.7□□□□□ -0.22
Hcn1O88704 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.7□□□□□ -0.22
Hcn1O88704 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Hcn1O88704 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.7□□□□□ -0.22
Hcn1O88704 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Hcn1O88704 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Hcn1O88704 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.7□□□□□ -0.22
Hcn1O88704 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.7□□□□□ -0.22
Hcn1O88704 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hcn1O88704 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hcn1O88704 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Hcn1O88704 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hcn1O88704 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.69□□□□□ -0.22
Hcn1O88704 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hcn1O88704 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Hcn1O88704 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hcn1O88704 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hcn1O88704 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.69□□□□□ -0.22
Hcn1O88704 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
Hcn1O88704 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hcn1O88704 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hcn1O88704 Rprl2-201ENSMUST00000157150 290 ntBASIC13.69□□□□□ -0.22
Hcn1O88704 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hcn1O88704 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.69□□□□□ -0.22
Hcn1O88704 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hcn1O88704 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Hcn1O88704 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hcn1O88704 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hcn1O88704 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hcn1O88704 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hcn1O88704 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hcn1O88704 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hcn1O88704 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hcn1O88704 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hcn1O88704 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hcn1O88704 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hcn1O88704 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hcn1O88704 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Hcn1O88704 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.68□□□□□ -0.22
Hcn1O88704 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.68□□□□□ -0.22
Hcn1O88704 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hcn1O88704 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 Gm13365-201ENSMUST00000121188 973 ntBASIC13.68□□□□□ -0.22
Hcn1O88704 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.68□□□□□ -0.22
Hcn1O88704 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.68□□□□□ -0.22
Hcn1O88704 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.68□□□□□ -0.22
Hcn1O88704 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.68□□□□□ -0.22
Hcn1O88704 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hcn1O88704 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hcn1O88704 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
Hcn1O88704 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hcn1O88704 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hcn1O88704 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.67□□□□□ -0.22
Hcn1O88704 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hcn1O88704 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hcn1O88704 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hcn1O88704 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hcn1O88704 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.67□□□□□ -0.22
Hcn1O88704 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hcn1O88704 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hcn1O88704 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hcn1O88704 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hcn1O88704 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Hcn1O88704 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 173.3 ms