Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.21□□□□□ -0.13
Ldb2O55203 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb2O55203 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ldb2O55203 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.21□□□□□ -0.13
Ldb2O55203 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Ldb2O55203 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ldb2O55203 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.21□□□□□ -0.14
Ldb2O55203 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ldb2O55203 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ldb2O55203 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Ldb2O55203 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ldb2O55203 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ldb2O55203 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb2O55203 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.2□□□□□ -0.14
Ldb2O55203 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb2O55203 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.2□□□□□ -0.14
Ldb2O55203 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb2O55203 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb2O55203 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb2O55203 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ldb2O55203 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb2O55203 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb2O55203 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ldb2O55203 Gm5566-201ENSMUST00000116118 459 ntBASIC14.2□□□□□ -0.14
Ldb2O55203 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.2□□□□□ -0.14
Ldb2O55203 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb2O55203 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ldb2O55203 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb2O55203 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb2O55203 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb2O55203 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb2O55203 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb2O55203 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ldb2O55203 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.2□□□□□ -0.14
Ldb2O55203 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ldb2O55203 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb2O55203 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb2O55203 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb2O55203 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb2O55203 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb2O55203 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ldb2O55203 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb2O55203 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb2O55203 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb2O55203 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Ldb2O55203 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.19□□□□□ -0.14
Ldb2O55203 Gm15693-201ENSMUST00000120470 637 ntBASIC14.19□□□□□ -0.14
Ldb2O55203 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb2O55203 Gm9719-201ENSMUST00000162765 543 ntBASIC14.19□□□□□ -0.14
Ldb2O55203 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.19□□□□□ -0.14
Ldb2O55203 Gm45453-201ENSMUST00000211758 853 ntBASIC14.19□□□□□ -0.14
Ldb2O55203 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.19□□□□□ -0.14
Ldb2O55203 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Ldb2O55203 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb2O55203 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb2O55203 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb2O55203 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ldb2O55203 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Ldb2O55203 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb2O55203 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb2O55203 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb2O55203 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Ldb2O55203 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb2O55203 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ldb2O55203 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb2O55203 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb2O55203 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb2O55203 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb2O55203 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.18□□□□□ -0.14
Ldb2O55203 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb2O55203 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Ldb2O55203 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.18□□□□□ -0.14
Ldb2O55203 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.18□□□□□ -0.14
Ldb2O55203 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.18□□□□□ -0.14
Ldb2O55203 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb2O55203 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb2O55203 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.18□□□□□ -0.14
Ldb2O55203 Gm15957-201ENSMUST00000118893 974 ntBASIC14.18□□□□□ -0.14
Ldb2O55203 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb2O55203 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.18□□□□□ -0.14
Ldb2O55203 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.18□□□□□ -0.14
Ldb2O55203 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb2O55203 AA619741-201ENSMUST00000195095 646 ntBASIC14.18□□□□□ -0.14
Ldb2O55203 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.18□□□□□ -0.14
Ldb2O55203 Gm7774-201ENSMUST00000200064 533 ntBASIC14.18□□□□□ -0.14
Ldb2O55203 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.18□□□□□ -0.14
Ldb2O55203 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ldb2O55203 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb2O55203 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ldb2O55203 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb2O55203 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.18□□□□□ -0.14
Ldb2O55203 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb2O55203 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb2O55203 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb2O55203 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb2O55203 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ldb2O55203 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ldb2O55203 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.17□□□□□ -0.14
Ldb2O55203 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ldb2O55203 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms