Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Efnb3O35393 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.29□□□□□ -0.6
Efnb3O35393 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Efnb3O35393 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Efnb3O35393 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.29□□□□□ -0.6
Efnb3O35393 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.29□□□□□ -0.6
Efnb3O35393 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Efnb3O35393 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Gm11452-201ENSMUST00000122376 690 ntBASIC11.29□□□□□ -0.6
Efnb3O35393 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.29□□□□□ -0.6
Efnb3O35393 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.29□□□□□ -0.6
Efnb3O35393 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.29□□□□□ -0.6
Efnb3O35393 Olfr286-202ENSMUST00000205305 969 ntBASIC11.29□□□□□ -0.6
Efnb3O35393 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Efnb3O35393 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.29□□□□□ -0.6
Efnb3O35393 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Gm18246-201ENSMUST00000221023 728 ntBASIC11.29□□□□□ -0.6
Efnb3O35393 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Efnb3O35393 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.29□□□□□ -0.6
Efnb3O35393 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Efnb3O35393 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.29□□□□□ -0.6
Efnb3O35393 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Efnb3O35393 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.28□□□□□ -0.6
Efnb3O35393 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.28□□□□□ -0.6
Efnb3O35393 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.28□□□□□ -0.6
Efnb3O35393 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.28□□□□□ -0.6
Efnb3O35393 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Efnb3O35393 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Efnb3O35393 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Efnb3O35393 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Efnb3O35393 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Efnb3O35393 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Efnb3O35393 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
Efnb3O35393 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.28□□□□□ -0.6
Efnb3O35393 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.28□□□□□ -0.6
Efnb3O35393 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
Efnb3O35393 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.28□□□□□ -0.6
Efnb3O35393 Gm2451-201ENSMUST00000199447 999 ntBASIC11.28□□□□□ -0.6
Efnb3O35393 Gm10290-201ENSMUST00000200451 999 ntBASIC11.28□□□□□ -0.6
Efnb3O35393 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Efnb3O35393 Gm10060-201ENSMUST00000212002 111 ntBASIC11.28□□□□□ -0.6
Efnb3O35393 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.28□□□□□ -0.6
Efnb3O35393 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Efnb3O35393 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms