Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.29■□□□□ 0.04
Cpsf2O35218 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Cpsf2O35218 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.29■□□□□ 0.04
Cpsf2O35218 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cpsf2O35218 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf2O35218 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cpsf2O35218 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cpsf2O35218 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cpsf2O35218 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.28■□□□□ 0.04
Cpsf2O35218 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.28■□□□□ 0.04
Cpsf2O35218 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.28■□□□□ 0.04
Cpsf2O35218 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
Cpsf2O35218 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.28■□□□□ 0.04
Cpsf2O35218 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.28■□□□□ 0.04
Cpsf2O35218 Gm14042-201ENSMUST00000120139 833 ntBASIC15.28■□□□□ 0.04
Cpsf2O35218 Gm15483-201ENSMUST00000120338 456 ntBASIC15.28■□□□□ 0.04
Cpsf2O35218 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Gm18733-201ENSMUST00000173950 856 ntBASIC15.28■□□□□ 0.04
Cpsf2O35218 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.28■□□□□ 0.04
Cpsf2O35218 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.28■□□□□ 0.04
Cpsf2O35218 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.28■□□□□ 0.04
Cpsf2O35218 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf2O35218 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.28■□□□□ 0.04
Cpsf2O35218 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Cpsf2O35218 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf2O35218 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf2O35218 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.27■□□□□ 0.04
Cpsf2O35218 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cpsf2O35218 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf2O35218 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.27■□□□□ 0.04
Cpsf2O35218 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf2O35218 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf2O35218 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cpsf2O35218 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf2O35218 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf2O35218 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf2O35218 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cpsf2O35218 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cpsf2O35218 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Cpsf2O35218 Gm37230-201ENSMUST00000194491 818 ntBASIC15.27■□□□□ 0.04
Cpsf2O35218 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf2O35218 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf2O35218 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf2O35218 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf2O35218 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf2O35218 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cpsf2O35218 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf2O35218 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf2O35218 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf2O35218 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf2O35218 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cpsf2O35218 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cpsf2O35218 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf2O35218 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.26■□□□□ 0.03
Cpsf2O35218 Gm45098-201ENSMUST00000207179 657 ntBASIC15.26■□□□□ 0.03
Cpsf2O35218 Gm9182-201ENSMUST00000217829 639 ntBASIC15.26■□□□□ 0.03
Cpsf2O35218 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.26■□□□□ 0.03
Cpsf2O35218 Psmb5-202ENSMUST00000227257 622 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms