Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Gm11801-201ENSMUST00000117807 746 ntBASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Gm13316-201ENSMUST00000140537 691 ntBASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Col6a3E9PWQ3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.96□□□□□ -0.18
Col6a3E9PWQ3 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.96□□□□□ -0.18
Col6a3E9PWQ3 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Col6a3E9PWQ3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col6a3E9PWQ3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col6a3E9PWQ3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Celf4-206ENSMUST00000224553 1729 ntBASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Gm13665-201ENSMUST00000120830 528 ntBASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a3E9PWQ3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Gm9555-201ENSMUST00000200908 583 ntBASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Col6a3E9PWQ3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a3E9PWQ3 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms