Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrn3B2RS91 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrn3B2RS91 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrn3B2RS91 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrn3B2RS91 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.4□□□□□ -0.1
Rrn3B2RS91 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.4□□□□□ -0.1
Rrn3B2RS91 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrn3B2RS91 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrn3B2RS91 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrn3B2RS91 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rrn3B2RS91 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.4□□□□□ -0.1
Rrn3B2RS91 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrn3B2RS91 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrn3B2RS91 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rrn3B2RS91 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rrn3B2RS91 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rrn3B2RS91 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rrn3B2RS91 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrn3B2RS91 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rrn3B2RS91 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrn3B2RS91 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrn3B2RS91 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrn3B2RS91 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.39□□□□□ -0.11
Rrn3B2RS91 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Gm8410-201ENSMUST00000117225 605 ntBASIC14.39□□□□□ -0.11
Rrn3B2RS91 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.39□□□□□ -0.11
Rrn3B2RS91 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.39□□□□□ -0.11
Rrn3B2RS91 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rrn3B2RS91 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.38□□□□□ -0.11
Rrn3B2RS91 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrn3B2RS91 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Gm6415-201ENSMUST00000118488 348 ntBASIC14.38□□□□□ -0.11
Rrn3B2RS91 Gm13015-201ENSMUST00000118674 204 ntBASIC14.38□□□□□ -0.11
Rrn3B2RS91 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rrn3B2RS91 Gm25144-201ENSMUST00000179561 110 ntBASIC14.38□□□□□ -0.11
Rrn3B2RS91 Gm25352-201ENSMUST00000179815 110 ntBASIC14.38□□□□□ -0.11
Rrn3B2RS91 Gm37230-201ENSMUST00000194491 818 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms